Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 AC064862.7-201ENST00000604520 867 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 AC013467.2-201ENST00000605472 835 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 AP001269.4-201ENST00000609611 512 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 AC012615.1-201ENST00000565797 1299 ntBASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 AC138894.3-201ENST00000603787 634 ntBASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 AC092119.3-201ENST00000612618 583 ntBASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 NPAP1P7-201ENST00000613027 823 ntBASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 AC010491.1-201ENST00000563101 2797 ntBASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 PKD1P5-201ENST00000532415 10291 ntBASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.13□□□□□ -0.15
HDHD3Q9BSH5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 AL591684.3-201ENST00000605187 298 ntBASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms