Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 SPDYE21P-201ENST00000413323 827 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 TSSC2-201ENST00000450217 709 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 TOB2P1-201ENST00000469761 992 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.72□□□□□ -0.37
VGLL1Q99990 KRT18P21-201ENST00000515767 1272 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.72□□□□□ -0.37
VGLL1Q99990 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.72□□□□□ -0.37
VGLL1Q99990 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.72□□□□□ -0.37
VGLL1Q99990 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 AC006538.1-201ENST00000567905 1585 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.72□□□□□ -0.37
VGLL1Q99990 MIR600HG-201ENST00000449175 5984 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VGLL1Q99990 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VGLL1Q99990 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.71□□□□□ -0.37
VGLL1Q99990 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 AC022188.1-201ENST00000620960 1664 ntBASIC12.71□□□□□ -0.37
VGLL1Q99990 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 ME2P1-201ENST00000426028 1970 ntBASIC12.71□□□□□ -0.37
VGLL1Q99990 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VGLL1Q99990 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.71□□□□□ -0.37
VGLL1Q99990 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.71□□□□□ -0.37
VGLL1Q99990 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
VGLL1Q99990 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.71□□□□□ -0.37
VGLL1Q99990 DRAXINP1-201ENST00000437611 948 ntBASIC12.71□□□□□ -0.37
VGLL1Q99990 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.71□□□□□ -0.37
VGLL1Q99990 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.71□□□□□ -0.37
VGLL1Q99990 TPSP2-201ENST00000561760 610 ntBASIC12.71□□□□□ -0.37
VGLL1Q99990 AL049597.2-201ENST00000565575 961 ntBASIC12.71□□□□□ -0.37
VGLL1Q99990 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VGLL1Q99990 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.71□□□□□ -0.37
VGLL1Q99990 AP000867.4-201ENST00000641616 219 ntBASIC12.71□□□□□ -0.37
VGLL1Q99990 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VGLL1Q99990 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.71□□□□□ -0.38
VGLL1Q99990 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.71□□□□□ -0.38
VGLL1Q99990 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.71□□□□□ -0.38
VGLL1Q99990 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VGLL1Q99990 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
VGLL1Q99990 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms