Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 AL773604.1-201ENST00000617417 272 ntBASIC16.28■□□□□ 0.2
NCLNQ969V3 AC073592.4-201ENST00000623827 446 ntBASIC16.28■□□□□ 0.2
NCLNQ969V3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NCLNQ969V3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCLNQ969V3 AL662844.4-201ENST00000606367 2838 ntBASIC16.27■□□□□ 0.2
NCLNQ969V3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
NCLNQ969V3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.27■□□□□ 0.2
NCLNQ969V3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NCLNQ969V3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
NCLNQ969V3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NCLNQ969V3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.27■□□□□ 0.2
NCLNQ969V3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.27■□□□□ 0.2
NCLNQ969V3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.27■□□□□ 0.2
NCLNQ969V3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.27■□□□□ 0.2
NCLNQ969V3 AC018712.1-201ENST00000455767 687 ntBASIC16.27■□□□□ 0.2
NCLNQ969V3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.27■□□□□ 0.2
NCLNQ969V3 AC124947.2-201ENST00000547118 1133 ntBASIC16.27■□□□□ 0.2
NCLNQ969V3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.27■□□□□ 0.2
NCLNQ969V3 MTDHP4-201ENST00000600287 670 ntBASIC16.27■□□□□ 0.2
NCLNQ969V3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.27■□□□□ 0.2
NCLNQ969V3 AL022326.1-202ENST00000641533 845 ntBASIC16.27■□□□□ 0.2
NCLNQ969V3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NCLNQ969V3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCLNQ969V3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
NCLNQ969V3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.27■□□□□ 0.19
NCLNQ969V3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCLNQ969V3 AC148477.5-201ENST00000625164 1645 ntBASIC16.27■□□□□ 0.19
NCLNQ969V3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
NCLNQ969V3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
NCLNQ969V3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.26■□□□□ 0.19
NCLNQ969V3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.26■□□□□ 0.19
NCLNQ969V3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.26■□□□□ 0.19
NCLNQ969V3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.26■□□□□ 0.19
NCLNQ969V3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.26■□□□□ 0.19
NCLNQ969V3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.26■□□□□ 0.19
NCLNQ969V3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.26■□□□□ 0.19
NCLNQ969V3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.26■□□□□ 0.19
NCLNQ969V3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.26■□□□□ 0.19
NCLNQ969V3 AC025062.2-201ENST00000605477 670 ntBASIC16.26■□□□□ 0.19
NCLNQ969V3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.26■□□□□ 0.19
NCLNQ969V3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCLNQ969V3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms