Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC004461.1-201ENST00000412461 403 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 FAM86C2P-203ENST00000528684 1004 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SNHG9-202ENST00000564014 471 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC022145.2-201ENST00000598203 171 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AL513210.1-201ENST00000629608 234 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AC079781.4-201ENST00000641908 219 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 HLA-A-202ENST00000376806 1854 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SCAMP4Q969E2 AL031731.1-201ENST00000642131 2094 ntBASIC16.54■□□□□ 0.24
SCAMP4Q969E2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 AC254562.1-201ENST00000417586 456 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 CNN2P11-201ENST00000429351 262 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 SPDYE11-202ENST00000450699 704 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 AC079140.1-201ENST00000508039 487 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 SPDYE9P-201ENST00000570642 692 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 SPDYE10P-202ENST00000612005 668 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 SPDYE8P-202ENST00000612377 668 ntBASIC16.53■□□□□ 0.24
SCAMP4Q969E2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAMP4Q969E2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.52■□□□□ 0.24
SCAMP4Q969E2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms