Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AL441883.1-201ENST00000566170 1045 ntBASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AC140113.3-201ENST00000605663 199 ntBASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AL138966.2-201ENST00000621997 464 ntBASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 AL671710.1-201ENST00000610245 2349 ntBASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
CNIH3Q8TBE1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 FAM220CP-201ENST00000395253 831 ntBASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 AC006058.4-201ENST00000624016 1670 ntBASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 AC002310.6-201ENST00000624451 1377 ntBASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.3■□□□□ 0.04
CNIH3Q8TBE1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 NFIC-211ENST00000641145 8399 ntBASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 AC003669.1-201ENST00000334569 611 ntBASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 KLF4P1-201ENST00000412782 1185 ntBASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms