Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 AC008556.1-201ENST00000610908 2040 ntBASIC10.28□□□□□ -0.76
SVIPQ8NHG7 AL583810.2-201ENST00000556430 3254 ntBASIC10.28□□□□□ -0.76
SVIPQ8NHG7 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 SHC1P1-201ENST00000425230 1745 ntBASIC10.28□□□□□ -0.76
SVIPQ8NHG7 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 C8B-206ENST00000543257 2382 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 PPRC1-202ENST00000370012 2163 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 GGT4P-201ENST00000623672 1708 ntBASIC10.27□□□□□ -0.76
SVIPQ8NHG7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 CHP1-201ENST00000334660 3329 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
SVIPQ8NHG7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.27□□□□□ -0.77
SVIPQ8NHG7 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 AC239800.2-201ENST00000443018 2675 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 AC092171.5-201ENST00000608012 942 ntBASIC10.27□□□□□ -0.77
SVIPQ8NHG7 AC099654.11-201ENST00000638857 294 ntBASIC10.27□□□□□ -0.77
SVIPQ8NHG7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 AL390755.1-201ENST00000623716 2027 ntBASIC10.27□□□□□ -0.77
SVIPQ8NHG7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 UPRT-202ENST00000373379 2234 ntTSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 UBTFL11-201ENST00000428234 2252 ntBASIC10.27□□□□□ -0.77
SVIPQ8NHG7 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms