Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 ATP5G2P4-201ENST00000442175 420 ntBASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AL132655.2-201ENST00000596276 594 ntBASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 AC016396.2-201ENST00000562575 1417 ntBASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 CETN4P-206ENST00000642099 2168 ntBASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TMEFF1Q8IYR6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 RPL37AP1-201ENST00000412502 279 ntBASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 TP53TG3HP-202ENST00000569755 579 ntBASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 MIR6752-201ENST00000618442 71 ntBASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEFF1Q8IYR6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AC087499.5-201ENST00000452760 1342 ntBASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 RN7SL828P-201ENST00000607615 303 ntBASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 SPTSSB-204ENST00000617024 1292 ntBASIC16.48■□□□□ 0.23
TMEFF1Q8IYR6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms