Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 EMBP1-201ENST00000458200 901 ntBASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 RPS15P9-201ENST00000494093 319 ntBASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 AF228730.7-201ENST00000641842 219 ntBASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 RNPS1P1-201ENST00000507437 918 ntBASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 MPDU1-223ENST00000582151 728 ntBASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 REXO1L3P-201ENST00000622202 1288 ntBASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00346Q8IVM7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms