Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD1LQ86WJ1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 AC012569.1-201ENST00000591191 1524 ntBASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 MRPL3P1-201ENST00000400109 1033 ntBASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 AL160237.2-201ENST00000556165 472 ntBASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD1LQ86WJ1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 LINC01144-201ENST00000626198 1710 ntBASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 PRSS29P-201ENST00000440800 595 ntBASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD1LQ86WJ1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 OR6D1P-203ENST00000641209 4860 ntBASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 AC098831.1-202ENST00000438821 336 ntBASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 AC108751.1-201ENST00000490852 363 ntBASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 AC116407.3-201ENST00000623905 1129 ntBASIC20.58■□□□□ 0.89
CHD1LQ86WJ1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CHD1LQ86WJ1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms