Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDZRN4Q6ZMN7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 AF238378.1-201ENST00000526806 358 ntBASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
PDZRN4Q6ZMN7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDZRN4Q6ZMN7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDZRN4Q6ZMN7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
PDZRN4Q6ZMN7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PDZRN4Q6ZMN7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDZRN4Q6ZMN7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDZRN4Q6ZMN7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 AC046185.3-201ENST00000623228 1824 ntBASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 AC009533.2-201ENST00000543664 586 ntBASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 TP73-AS1-210ENST00000637775 1455 ntBASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDZRN4Q6ZMN7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms