Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AC009053.2-201ENST00000563701 2365 ntBASIC20.29■□□□□ 0.84
TNNI3KQ59H18 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNNI3KQ59H18 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 IGHV3-62-201ENST00000520057 340 ntBASIC20.28■□□□□ 0.84
TNNI3KQ59H18 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 AC009093.7-201ENST00000623853 1223 ntBASIC20.28■□□□□ 0.84
TNNI3KQ59H18 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 PCGF3-213ENST00000620529 1899 ntBASIC20.28■□□□□ 0.84
TNNI3KQ59H18 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.28■□□□□ 0.84
TNNI3KQ59H18 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 FOXO1B-201ENST00000504678 1527 ntBASIC20.27■□□□□ 0.84
TNNI3KQ59H18 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 AC142381.1-201ENST00000426099 345 ntBASIC20.27■□□□□ 0.84
TNNI3KQ59H18 GPS2P2-201ENST00000430745 888 ntBASIC20.27■□□□□ 0.84
TNNI3KQ59H18 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 PRYP6-201ENST00000514804 343 ntBASIC20.27■□□□□ 0.84
TNNI3KQ59H18 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 SLC25A39P2-201ENST00000537614 270 ntBASIC20.27■□□□□ 0.84
TNNI3KQ59H18 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TNNI3KQ59H18 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TNNI3KQ59H18 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNNI3KQ59H18 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.27■□□□□ 0.83
TNNI3KQ59H18 UXT-AS1-201ENST00000590504 1525 ntBASIC20.27■□□□□ 0.83
TNNI3KQ59H18 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.27■□□□□ 0.83
TNNI3KQ59H18 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.27■□□□□ 0.83
TNNI3KQ59H18 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.27■□□□□ 0.83
TNNI3KQ59H18 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 KRT18P32-201ENST00000424695 1287 ntBASIC20.26■□□□□ 0.83
TNNI3KQ59H18 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
TNNI3KQ59H18 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms