Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EFEMP1Q12805 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
EFEMP1Q12805 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 AL627223.1-201ENST00000416693 442 ntBASIC17.31■□□□□ 0.36
EFEMP1Q12805 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 AC023141.5-201ENST00000458585 616 ntBASIC17.31■□□□□ 0.36
EFEMP1Q12805 AC069335.1-201ENST00000489972 472 ntBASIC17.31■□□□□ 0.36
EFEMP1Q12805 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 AL139011.1-202ENST00000642063 584 ntBASIC17.31■□□□□ 0.36
EFEMP1Q12805 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EFEMP1Q12805 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EFEMP1Q12805 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 AL512652.2-201ENST00000625156 1716 ntBASIC17.3■□□□□ 0.36
EFEMP1Q12805 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 TSEN15P1-201ENST00000423257 515 ntBASIC17.3■□□□□ 0.36
EFEMP1Q12805 PMS2P2-201ENST00000425039 1128 ntBASIC17.3■□□□□ 0.36
EFEMP1Q12805 KRT18P34-201ENST00000488218 1270 ntBASIC17.3■□□□□ 0.36
EFEMP1Q12805 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 UXT-AS1-201ENST00000590504 1525 ntBASIC17.3■□□□□ 0.36
EFEMP1Q12805 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.3■□□□□ 0.36
EFEMP1Q12805 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFEMP1Q12805 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 AC078925.2-201ENST00000624013 1973 ntBASIC17.29■□□□□ 0.36
EFEMP1Q12805 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFEMP1Q12805 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFEMP1Q12805 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.29■□□□□ 0.36
EFEMP1Q12805 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFEMP1Q12805 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFEMP1Q12805 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms