Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.55□□□□□ -0.08
ATP1B3P54709 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.55□□□□□ -0.08
ATP1B3P54709 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.55□□□□□ -0.08
ATP1B3P54709 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ATP1B3P54709 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.55□□□□□ -0.08
ATP1B3P54709 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 AC005052.1-201ENST00000625181 2492 ntBASIC14.55□□□□□ -0.08
ATP1B3P54709 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.55□□□□□ -0.08
ATP1B3P54709 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
ATP1B3P54709 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.55□□□□□ -0.08
ATP1B3P54709 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.55□□□□□ -0.08
ATP1B3P54709 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP1B3P54709 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 AL645728.1-201ENST00000366221 2101 ntBASIC14.54□□□□□ -0.08
ATP1B3P54709 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ATP1B3P54709 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.54□□□□□ -0.08
ATP1B3P54709 BX005266.1-201ENST00000473402 457 ntBASIC14.54□□□□□ -0.08
ATP1B3P54709 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.54□□□□□ -0.08
ATP1B3P54709 AL353135.1-201ENST00000606729 504 ntBASIC14.54□□□□□ -0.08
ATP1B3P54709 AP001269.4-201ENST00000609611 512 ntBASIC14.54□□□□□ -0.08
ATP1B3P54709 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.54□□□□□ -0.08
ATP1B3P54709 AL022326.1-202ENST00000641533 845 ntBASIC14.54□□□□□ -0.08
ATP1B3P54709 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP1B3P54709 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ATP1B3P54709 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP1B3P54709 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.53□□□□□ -0.08
ATP1B3P54709 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 AC243591.1-201ENST00000452967 1364 ntBASIC14.53□□□□□ -0.08
ATP1B3P54709 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.53□□□□□ -0.08
ATP1B3P54709 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATP1B3P54709 AL590787.1-201ENST00000568856 1315 ntBASIC14.53□□□□□ -0.08
ATP1B3P54709 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.53□□□□□ -0.08
ATP1B3P54709 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP1B3P54709 RBM17P3-201ENST00000417687 1192 ntBASIC14.53□□□□□ -0.08
ATP1B3P54709 FOSL1P1-201ENST00000511041 816 ntBASIC14.53□□□□□ -0.08
ATP1B3P54709 AC106795.1-205ENST00000512851 1056 ntBASIC14.53□□□□□ -0.08
ATP1B3P54709 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms