Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.84■□□□□ 0.29
LIMK2P53671 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
LIMK2P53671 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 PCDHA1-201ENST00000378133 2726 ntBASIC16.84■□□□□ 0.29
LIMK2P53671 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 MTHFR-217ENST00000641820 1569 ntBASIC16.84■□□□□ 0.29
LIMK2P53671 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LIMK2P53671 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
LIMK2P53671 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LIMK2P53671 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LIMK2P53671 CROCCP1-201ENST00000426910 5675 ntBASIC16.83■□□□□ 0.29
LIMK2P53671 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
LIMK2P53671 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
LIMK2P53671 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LIMK2P53671 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.83■□□□□ 0.28
LIMK2P53671 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LIMK2P53671 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 YBX2P1-201ENST00000394192 760 ntBASIC16.83■□□□□ 0.28
LIMK2P53671 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.83■□□□□ 0.28
LIMK2P53671 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.83■□□□□ 0.28
LIMK2P53671 DNAJB3-201ENST00000446806 729 ntBASIC16.83■□□□□ 0.28
LIMK2P53671 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.83■□□□□ 0.28
LIMK2P53671 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.83■□□□□ 0.28
LIMK2P53671 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.83■□□□□ 0.28
LIMK2P53671 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.83■□□□□ 0.28
LIMK2P53671 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.83■□□□□ 0.28
LIMK2P53671 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.83■□□□□ 0.28
LIMK2P53671 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.83■□□□□ 0.28
LIMK2P53671 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.83■□□□□ 0.28
LIMK2P53671 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIMK2P53671 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.83■□□□□ 0.28
LIMK2P53671 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.82■□□□□ 0.28
LIMK2P53671 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.82■□□□□ 0.28
LIMK2P53671 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.82■□□□□ 0.28
LIMK2P53671 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIMK2P53671 TOP3BP1-201ENST00000420768 1380 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms