Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LSP1P33241 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.8■□□□□ 0.28
LSP1P33241 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSP1P33241 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LSP1P33241 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.8■□□□□ 0.28
LSP1P33241 AC007292.2-201ENST00000593524 1812 ntBASIC16.8■□□□□ 0.28
LSP1P33241 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 AC069224.1-201ENST00000566372 1715 ntBASIC16.79■□□□□ 0.28
LSP1P33241 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 AC063926.3-201ENST00000624734 5658 ntBASIC16.79■□□□□ 0.28
LSP1P33241 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 KRT17P2-201ENST00000300992 1314 ntBASIC16.79■□□□□ 0.28
LSP1P33241 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 AC111152.3-201ENST00000569699 673 ntBASIC16.79■□□□□ 0.28
LSP1P33241 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.79■□□□□ 0.28
LSP1P33241 MIR4785-201ENST00000585005 73 ntBASIC16.79■□□□□ 0.28
LSP1P33241 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.79■□□□□ 0.28
LSP1P33241 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LSP1P33241 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSP1P33241 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.79■□□□□ 0.28
LSP1P33241 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LSP1P33241 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.78■□□□□ 0.28
LSP1P33241 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LSP1P33241 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.78■□□□□ 0.28
LSP1P33241 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LSP1P33241 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LSP1P33241 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.78■□□□□ 0.28
LSP1P33241 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 NEK4P2-201ENST00000580004 1012 ntBASIC16.78■□□□□ 0.28
LSP1P33241 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.78■□□□□ 0.28
LSP1P33241 Z99916.2-201ENST00000604037 246 ntBASIC16.78■□□□□ 0.28
LSP1P33241 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.78■□□□□ 0.28
LSP1P33241 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LSP1P33241 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSP1P33241 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.78■□□□□ 0.28
LSP1P33241 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms