Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CASP1P29466 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP1P29466 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CASP1P29466 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP1P29466 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP1P29466 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CASP1P29466 SLC25A6P4-201ENST00000586535 553 ntBASIC18.66■□□□□ 0.58
CASP1P29466 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.66■□□□□ 0.58
CASP1P29466 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP1P29466 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP1P29466 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
CASP1P29466 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.66■□□□□ 0.58
CASP1P29466 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CASP1P29466 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP1P29466 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CASP1P29466 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP1P29466 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.65■□□□□ 0.58
CASP1P29466 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CASP1P29466 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP1P29466 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CASP1P29466 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.65■□□□□ 0.58
CASP1P29466 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.65■□□□□ 0.58
CASP1P29466 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.65■□□□□ 0.58
CASP1P29466 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CASP1P29466 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CASP1P29466 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.65■□□□□ 0.58
CASP1P29466 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.65■□□□□ 0.58
CASP1P29466 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP1P29466 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASP1P29466 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CASP1P29466 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP1P29466 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP1P29466 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CASP1P29466 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASP1P29466 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP1P29466 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CASP1P29466 OR6D1P-203ENST00000641209 4860 ntBASIC18.65■□□□□ 0.58
CASP1P29466 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.64■□□□□ 0.58
CASP1P29466 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CASP1P29466 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASP1P29466 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASP1P29466 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASP1P29466 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASP1P29466 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASP1P29466 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
CASP1P29466 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.64■□□□□ 0.57
CASP1P29466 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.64■□□□□ 0.57
CASP1P29466 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CASP1P29466 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CASP1P29466 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CASP1P29466 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 MRPL20P1-201ENST00000400819 433 ntBASIC18.64■□□□□ 0.57
CASP1P29466 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.64■□□□□ 0.57
CASP1P29466 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.64■□□□□ 0.57
CASP1P29466 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.64■□□□□ 0.57
CASP1P29466 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 AC129492.6-201ENST00000611383 1305 ntBASIC18.64■□□□□ 0.57
CASP1P29466 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CASP1P29466 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CASP1P29466 AC046158.3-201ENST00000624947 2558 ntBASIC18.64■□□□□ 0.57
CASP1P29466 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP1P29466 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.64■□□□□ 0.57
CASP1P29466 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP1P29466 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP1P29466 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP1P29466 FAAHP1-202ENST00000446499 1238 ntBASIC18.63■□□□□ 0.57
CASP1P29466 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms