Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VCLP18206 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 PRSS29P-201ENST00000440800 595 ntBASIC16.85■□□□□ 0.29
VCLP18206 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 AC108073.2-201ENST00000464002 357 ntBASIC16.85■□□□□ 0.29
VCLP18206 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.85■□□□□ 0.29
VCLP18206 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.85■□□□□ 0.29
VCLP18206 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 AC027601.4-201ENST00000611259 610 ntBASIC16.85■□□□□ 0.29
VCLP18206 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.85■□□□□ 0.29
VCLP18206 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.85■□□□□ 0.29
VCLP18206 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCLP18206 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCLP18206 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
VCLP18206 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VCLP18206 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VCLP18206 CRYGEP-201ENST00000412192 528 ntBASIC16.84■□□□□ 0.29
VCLP18206 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.84■□□□□ 0.29
VCLP18206 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.84■□□□□ 0.29
VCLP18206 TERC-201ENST00000602385 541 ntBASIC16.84■□□□□ 0.29
VCLP18206 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.84■□□□□ 0.29
VCLP18206 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VCLP18206 AC132872.4-202ENST00000622924 2756 ntBASIC16.84■□□□□ 0.29
VCLP18206 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
VCLP18206 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.84■□□□□ 0.29
VCLP18206 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCLP18206 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.29
VCLP18206 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
VCLP18206 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
VCLP18206 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCLP18206 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
VCLP18206 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.83■□□□□ 0.28
VCLP18206 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VCLP18206 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
VCLP18206 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 MED15P5-201ENST00000423150 992 ntBASIC16.83■□□□□ 0.28
VCLP18206 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VCLP18206 AC034105.1-201ENST00000563488 319 ntBASIC16.83■□□□□ 0.28
VCLP18206 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.83■□□□□ 0.28
VCLP18206 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VCLP18206 AC007950.2-201ENST00000615045 2347 ntBASIC16.83■□□□□ 0.28
VCLP18206 AC010654.1-201ENST00000615722 808 ntBASIC16.83■□□□□ 0.28
VCLP18206 FAM197Y3-203ENST00000618346 717 ntBASIC16.83■□□□□ 0.28
VCLP18206 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.83■□□□□ 0.28
VCLP18206 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms