Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.96■□□□□ 0.47
SYN1P17600 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SYN1P17600 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.96■□□□□ 0.47
SYN1P17600 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.96■□□□□ 0.47
SYN1P17600 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.96■□□□□ 0.47
SYN1P17600 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.96■□□□□ 0.47
SYN1P17600 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.96■□□□□ 0.47
SYN1P17600 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.96■□□□□ 0.47
SYN1P17600 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.96■□□□□ 0.47
SYN1P17600 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.96■□□□□ 0.47
SYN1P17600 AL021578.1-201ENST00000613646 709 ntBASIC17.96■□□□□ 0.47
SYN1P17600 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.96■□□□□ 0.47
SYN1P17600 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.96■□□□□ 0.47
SYN1P17600 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYN1P17600 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SYN1P17600 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SYN1P17600 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SYN1P17600 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SYN1P17600 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.95■□□□□ 0.46
SYN1P17600 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.95■□□□□ 0.46
SYN1P17600 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.95■□□□□ 0.46
SYN1P17600 RRP7BP-205ENST00000566851 833 ntBASIC17.95■□□□□ 0.46
SYN1P17600 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.95■□□□□ 0.46
SYN1P17600 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 MIR6069-201ENST00000620069 79 ntBASIC17.95■□□□□ 0.46
SYN1P17600 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SYN1P17600 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SYN1P17600 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.95■□□□□ 0.46
SYN1P17600 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYN1P17600 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYN1P17600 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SYN1P17600 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.94■□□□□ 0.46
SYN1P17600 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.94■□□□□ 0.46
SYN1P17600 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.94■□□□□ 0.46
SYN1P17600 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SYN1P17600 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.94■□□□□ 0.46
SYN1P17600 BCRP2-202ENST00000447763 634 ntBASIC17.94■□□□□ 0.46
SYN1P17600 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.94■□□□□ 0.46
SYN1P17600 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.94■□□□□ 0.46
SYN1P17600 BCRP6-201ENST00000510112 632 ntBASIC17.94■□□□□ 0.46
SYN1P17600 BCRP7-201ENST00000511549 544 ntBASIC17.94■□□□□ 0.46
SYN1P17600 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.94■□□□□ 0.46
SYN1P17600 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.94■□□□□ 0.46
SYN1P17600 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 HCG11-201ENST00000411553 5696 ntBASIC17.94■□□□□ 0.46
SYN1P17600 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SYN1P17600 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.94■□□□□ 0.46
SYN1P17600 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYN1P17600 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYN1P17600 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.93■□□□□ 0.46
SYN1P17600 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYN1P17600 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms