Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.84■□□□□ 0.13
LAMP1P11279 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.84■□□□□ 0.13
LAMP1P11279 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.84■□□□□ 0.13
LAMP1P11279 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.84■□□□□ 0.13
LAMP1P11279 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.84■□□□□ 0.13
LAMP1P11279 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.84■□□□□ 0.13
LAMP1P11279 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LAMP1P11279 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.83■□□□□ 0.13
LAMP1P11279 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.13
LAMP1P11279 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LAMP1P11279 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LAMP1P11279 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LAMP1P11279 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LAMP1P11279 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.83■□□□□ 0.12
LAMP1P11279 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
LAMP1P11279 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LAMP1P11279 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LAMP1P11279 RNPS1P1-201ENST00000507437 918 ntBASIC15.83■□□□□ 0.12
LAMP1P11279 AC136632.2-201ENST00000512891 861 ntBASIC15.83■□□□□ 0.12
LAMP1P11279 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.83■□□□□ 0.12
LAMP1P11279 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.83■□□□□ 0.12
LAMP1P11279 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.83■□□□□ 0.12
LAMP1P11279 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.83■□□□□ 0.12
LAMP1P11279 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.83■□□□□ 0.12
LAMP1P11279 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LAMP1P11279 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
LAMP1P11279 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.83■□□□□ 0.12
LAMP1P11279 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 AL353732.1-201ENST00000569618 1459 ntBASIC15.83■□□□□ 0.12
LAMP1P11279 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LAMP1P11279 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LAMP1P11279 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LAMP1P11279 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.82■□□□□ 0.12
LAMP1P11279 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 DUSP5P1-201ENST00000441325 1139 ntBASIC15.82■□□□□ 0.12
LAMP1P11279 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.82■□□□□ 0.12
LAMP1P11279 KRT18P56-201ENST00000507275 550 ntBASIC15.82■□□□□ 0.12
LAMP1P11279 AC073648.2-201ENST00000510116 352 ntBASIC15.82■□□□□ 0.12
LAMP1P11279 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.82■□□□□ 0.12
LAMP1P11279 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.82■□□□□ 0.12
LAMP1P11279 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.82■□□□□ 0.12
LAMP1P11279 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.82■□□□□ 0.12
LAMP1P11279 GGTLC5P-201ENST00000617623 998 ntBASIC15.82■□□□□ 0.12
LAMP1P11279 TP73-AS1-207ENST00000624167 988 ntBASIC15.82■□□□□ 0.12
LAMP1P11279 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
LAMP1P11279 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LAMP1P11279 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LAMP1P11279 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.82■□□□□ 0.12
LAMP1P11279 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms