Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 AL136379.1-201ENST00000623471 2642 ntBASIC14.71□□□□□ -0.06
UBCP0CG48 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBCP0CG48 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
UBCP0CG48 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBCP0CG48 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBCP0CG48 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
UBCP0CG48 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBCP0CG48 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.71□□□□□ -0.06
UBCP0CG48 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBCP0CG48 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBCP0CG48 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
UBCP0CG48 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.7□□□□□ -0.06
UBCP0CG48 AC023824.1-201ENST00000562945 2975 ntBASIC14.7□□□□□ -0.06
UBCP0CG48 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
UBCP0CG48 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.7□□□□□ -0.06
UBCP0CG48 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.7□□□□□ -0.06
UBCP0CG48 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 TOP3BP1-201ENST00000420768 1380 ntBASIC14.7□□□□□ -0.06
UBCP0CG48 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBCP0CG48 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
UBCP0CG48 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.69□□□□□ -0.06
UBCP0CG48 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
UBCP0CG48 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.69□□□□□ -0.06
UBCP0CG48 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.69□□□□□ -0.06
UBCP0CG48 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 AP005117.1-201ENST00000584346 1413 ntBASIC14.69□□□□□ -0.06
UBCP0CG48 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.69□□□□□ -0.06
UBCP0CG48 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms