Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSDP07339 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 AC023824.1-201ENST00000562945 2975 ntBASIC13.91□□□□□ -0.18
CTSDP07339 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSDP07339 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CTSDP07339 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSDP07339 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 AK4P3-201ENST00000418260 669 ntBASIC13.9□□□□□ -0.18
CTSDP07339 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.9□□□□□ -0.18
CTSDP07339 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 TMPOP1-202ENST00000424642 1267 ntBASIC13.9□□□□□ -0.18
CTSDP07339 TSPY5P-201ENST00000426936 936 ntBASIC13.9□□□□□ -0.18
CTSDP07339 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.9□□□□□ -0.18
CTSDP07339 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSDP07339 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.9□□□□□ -0.18
CTSDP07339 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSDP07339 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSDP07339 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.9□□□□□ -0.18
CTSDP07339 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.9□□□□□ -0.18
CTSDP07339 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 NORAD-201ENST00000565493 5339 ntBASIC13.9□□□□□ -0.18
CTSDP07339 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 AC097637.2-201ENST00000624096 1997 ntBASIC13.9□□□□□ -0.18
CTSDP07339 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.9□□□□□ -0.18
CTSDP07339 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CTSDP07339 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CTSDP07339 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CTSDP07339 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.9□□□□□ -0.18
CTSDP07339 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CTSDP07339 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CTSDP07339 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CTSDP07339 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.9□□□□□ -0.19
CTSDP07339 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSDP07339 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.89□□□□□ -0.19
CTSDP07339 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 AL671710.1-201ENST00000610245 2349 ntBASIC13.89□□□□□ -0.19
CTSDP07339 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 RNF152P1-201ENST00000397754 604 ntBASIC13.89□□□□□ -0.19
CTSDP07339 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSDP07339 AL020989.1-201ENST00000422979 469 ntBASIC13.89□□□□□ -0.19
CTSDP07339 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms