Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.8■□□□□ 0.28
APODP05090 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.8■□□□□ 0.28
APODP05090 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.8■□□□□ 0.28
APODP05090 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.8■□□□□ 0.28
APODP05090 AL589739.1-201ENST00000607720 493 ntBASIC16.8■□□□□ 0.28
APODP05090 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.8■□□□□ 0.28
APODP05090 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
APODP05090 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
APODP05090 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 AC068880.1-201ENST00000507289 2297 ntBASIC16.8■□□□□ 0.28
APODP05090 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APODP05090 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
APODP05090 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.79■□□□□ 0.28
APODP05090 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
APODP05090 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.79■□□□□ 0.28
APODP05090 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.79■□□□□ 0.28
APODP05090 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
APODP05090 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
APODP05090 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
APODP05090 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 AC244107.1-201ENST00000442033 332 ntBASIC16.79■□□□□ 0.28
APODP05090 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
APODP05090 CRB3P1-201ENST00000449338 276 ntBASIC16.79■□□□□ 0.28
APODP05090 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.79■□□□□ 0.28
APODP05090 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.79■□□□□ 0.28
APODP05090 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.79■□□□□ 0.28
APODP05090 RN7SL828P-201ENST00000607615 303 ntBASIC16.79■□□□□ 0.28
APODP05090 AC004233.3-201ENST00000607794 1269 ntBASIC16.79■□□□□ 0.28
APODP05090 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.79■□□□□ 0.28
APODP05090 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.79■□□□□ 0.28
APODP05090 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
APODP05090 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 PCDHB17P-201ENST00000539533 2393 ntBASIC16.79■□□□□ 0.28
APODP05090 SNX33P1-201ENST00000592116 1762 ntBASIC16.79■□□□□ 0.28
APODP05090 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
APODP05090 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APODP05090 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
APODP05090 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
APODP05090 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.78■□□□□ 0.28
APODP05090 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
APODP05090 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.78■□□□□ 0.28
APODP05090 PIN1P1-201ENST00000412108 996 ntBASIC16.78■□□□□ 0.28
APODP05090 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.78■□□□□ 0.28
APODP05090 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.78■□□□□ 0.28
APODP05090 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.78■□□□□ 0.28
APODP05090 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.78■□□□□ 0.28
APODP05090 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.78■□□□□ 0.28
APODP05090 AL358472.5-202ENST00000641448 1267 ntBASIC16.78■□□□□ 0.28
APODP05090 AL139011.1-202ENST00000642063 584 ntBASIC16.78■□□□□ 0.28
APODP05090 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
APODP05090 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
APODP05090 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
APODP05090 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
APODP05090 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.78■□□□□ 0.28
APODP05090 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APODP05090 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.78■□□□□ 0.28
APODP05090 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.77■□□□□ 0.28
APODP05090 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APODP05090 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
APODP05090 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms