Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VAPBO95292 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VAPBO95292 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.81■□□□□ 0.28
VAPBO95292 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
VAPBO95292 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.81■□□□□ 0.28
VAPBO95292 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.8■□□□□ 0.28
VAPBO95292 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 AC129492.6-201ENST00000611383 1305 ntBASIC16.8■□□□□ 0.28
VAPBO95292 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 RPS2P28-201ENST00000314255 741 ntBASIC16.8■□□□□ 0.28
VAPBO95292 AC004870.1-201ENST00000315132 882 ntBASIC16.8■□□□□ 0.28
VAPBO95292 AL450487.1-201ENST00000426799 995 ntBASIC16.8■□□□□ 0.28
VAPBO95292 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
VAPBO95292 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VAPBO95292 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VAPBO95292 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VAPBO95292 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.79■□□□□ 0.28
VAPBO95292 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VAPBO95292 KRT8P39-201ENST00000396270 1433 ntBASIC16.79■□□□□ 0.28
VAPBO95292 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VAPBO95292 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 AC011270.2-201ENST00000624293 2550 ntBASIC16.79■□□□□ 0.28
VAPBO95292 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
VAPBO95292 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.79■□□□□ 0.28
VAPBO95292 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.79■□□□□ 0.28
VAPBO95292 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.79■□□□□ 0.28
VAPBO95292 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VAPBO95292 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.79■□□□□ 0.28
VAPBO95292 AL031008.1-201ENST00000619963 541 ntBASIC16.79■□□□□ 0.28
VAPBO95292 AC005593.1-201ENST00000624894 515 ntBASIC16.79■□□□□ 0.28
VAPBO95292 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.79■□□□□ 0.28
VAPBO95292 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VAPBO95292 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.79■□□□□ 0.28
VAPBO95292 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 AL353732.1-201ENST00000569618 1459 ntBASIC16.79■□□□□ 0.28
VAPBO95292 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VAPBO95292 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 CYP2T1P-202ENST00000641596 2535 ntBASIC16.78■□□□□ 0.28
VAPBO95292 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VAPBO95292 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 PCDHA1-201ENST00000378133 2726 ntBASIC16.78■□□□□ 0.28
VAPBO95292 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAPBO95292 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.78■□□□□ 0.28
VAPBO95292 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms