Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM3O75382 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 AC116353.5-201ENST00000638148 1699 ntBASIC15.63■□□□□ 0.09
TRIM3O75382 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM3O75382 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
TRIM3O75382 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM3O75382 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM3O75382 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM3O75382 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM3O75382 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM3O75382 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
TRIM3O75382 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRIM3O75382 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 SLC25A1P3-201ENST00000395415 828 ntBASIC15.62■□□□□ 0.09
TRIM3O75382 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.62■□□□□ 0.09
TRIM3O75382 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM3O75382 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
TRIM3O75382 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.62■□□□□ 0.09
TRIM3O75382 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.62■□□□□ 0.09
TRIM3O75382 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM3O75382 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
TRIM3O75382 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM3O75382 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM3O75382 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM3O75382 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRIM3O75382 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRIM3O75382 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM3O75382 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM3O75382 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM3O75382 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRIM3O75382 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 AC023511.2-201ENST00000618803 211 ntBASIC15.61■□□□□ 0.09
TRIM3O75382 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
TRIM3O75382 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM3O75382 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRIM3O75382 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRIM3O75382 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM3O75382 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRIM3O75382 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
TRIM3O75382 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM3O75382 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRIM3O75382 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.6■□□□□ 0.09
TRIM3O75382 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.6■□□□□ 0.09
TRIM3O75382 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRIM3O75382 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms