Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PDCD6O75340 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PDCD6O75340 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 AL365203.3-201ENST00000609742 2057 ntBASIC14.13□□□□□ -0.15
PDCD6O75340 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PDCD6O75340 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PDCD6O75340 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.13□□□□□ -0.15
PDCD6O75340 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDCD6O75340 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PDCD6O75340 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
PDCD6O75340 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.12□□□□□ -0.15
PDCD6O75340 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.12□□□□□ -0.15
PDCD6O75340 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.12□□□□□ -0.15
PDCD6O75340 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.12□□□□□ -0.15
PDCD6O75340 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.12□□□□□ -0.15
PDCD6O75340 MTDHP3-201ENST00000594186 672 ntBASIC14.12□□□□□ -0.15
PDCD6O75340 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.12□□□□□ -0.15
PDCD6O75340 AL732292.2-201ENST00000609649 430 ntBASIC14.12□□□□□ -0.15
PDCD6O75340 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.12□□□□□ -0.15
PDCD6O75340 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
PDCD6O75340 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.12□□□□□ -0.15
PDCD6O75340 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PDCD6O75340 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.12□□□□□ -0.15
PDCD6O75340 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.12□□□□□ -0.15
PDCD6O75340 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDCD6O75340 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.12□□□□□ -0.15
PDCD6O75340 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 AL031731.1-201ENST00000642131 2094 ntBASIC14.11□□□□□ -0.15
PDCD6O75340 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 AL596087.1-201ENST00000400979 1969 ntBASIC14.11□□□□□ -0.15
PDCD6O75340 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.11□□□□□ -0.15
PDCD6O75340 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.11□□□□□ -0.15
PDCD6O75340 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.11□□□□□ -0.15
PDCD6O75340 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.11□□□□□ -0.15
PDCD6O75340 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDCD6O75340 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.11□□□□□ -0.15
PDCD6O75340 AC004706.3-202ENST00000621574 984 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms