Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CACNA1FO60840 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CACNA1FO60840 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA1FO60840 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA1FO60840 AC005052.1-201ENST00000625181 2492 ntBASIC20.73■□□□□ 0.91
CACNA1FO60840 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.73■□□□□ 0.91
CACNA1FO60840 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA1FO60840 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1FO60840 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.73■□□□□ 0.91
CACNA1FO60840 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.73■□□□□ 0.91
CACNA1FO60840 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 AC006449.6-201ENST00000612330 2296 ntBASIC20.73■□□□□ 0.91
CACNA1FO60840 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CACNA1FO60840 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1FO60840 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
CACNA1FO60840 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CACNA1FO60840 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.72■□□□□ 0.91
CACNA1FO60840 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA1FO60840 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA1FO60840 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.72■□□□□ 0.91
CACNA1FO60840 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1FO60840 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CACNA1FO60840 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CACNA1FO60840 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CACNA1FO60840 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CACNA1FO60840 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.72■□□□□ 0.91
CACNA1FO60840 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CACNA1FO60840 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.72■□□□□ 0.91
CACNA1FO60840 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CACNA1FO60840 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CACNA1FO60840 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CACNA1FO60840 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 TEX28P1-201ENST00000613479 1221 ntBASIC20.71■□□□□ 0.91
CACNA1FO60840 TEX28P2-201ENST00000617764 1221 ntBASIC20.71■□□□□ 0.91
CACNA1FO60840 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.71■□□□□ 0.91
CACNA1FO60840 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.71■□□□□ 0.91
CACNA1FO60840 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.71■□□□□ 0.91
CACNA1FO60840 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CACNA1FO60840 TUBB3P1-201ENST00000405796 1332 ntBASIC20.7■□□□□ 0.91
CACNA1FO60840 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CACNA1FO60840 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.7■□□□□ 0.9
CACNA1FO60840 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1FO60840 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CACNA1FO60840 MRPS18AP1-201ENST00000414458 589 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms