Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 ACTG1P4-201ENST00000425123 1122 ntBASIC15.67■□□□□ 0.1
HCN1O60741 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 RPS15P9-201ENST00000494093 319 ntBASIC15.67■□□□□ 0.1
HCN1O60741 IGHV3-65-201ENST00000523210 341 ntBASIC15.67■□□□□ 0.1
HCN1O60741 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.67■□□□□ 0.1
HCN1O60741 AL353135.1-201ENST00000606729 504 ntBASIC15.67■□□□□ 0.1
HCN1O60741 AL805961.1-202ENST00000641562 540 ntBASIC15.67■□□□□ 0.1
HCN1O60741 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 AC103702.1-201ENST00000548801 2630 ntBASIC15.66■□□□□ 0.1
HCN1O60741 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HCN1O60741 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 AL603756.1-201ENST00000606511 2163 ntBASIC15.66■□□□□ 0.1
HCN1O60741 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 LINC00982-205ENST00000420957 435 ntBASIC15.66■□□□□ 0.1
HCN1O60741 PRSS29P-201ENST00000440800 595 ntBASIC15.66■□□□□ 0.1
HCN1O60741 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.66■□□□□ 0.1
HCN1O60741 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.66■□□□□ 0.1
HCN1O60741 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.66■□□□□ 0.1
HCN1O60741 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.66■□□□□ 0.1
HCN1O60741 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.66■□□□□ 0.1
HCN1O60741 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.66■□□□□ 0.1
HCN1O60741 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCN1O60741 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 AP002414.1-201ENST00000391405 1147 ntBASIC15.65■□□□□ 0.1
HCN1O60741 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.65■□□□□ 0.1
HCN1O60741 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.65■□□□□ 0.1
HCN1O60741 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.65■□□□□ 0.1
HCN1O60741 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
HCN1O60741 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.65■□□□□ 0.1
HCN1O60741 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 GGTLC5P-201ENST00000617623 998 ntBASIC15.65■□□□□ 0.1
HCN1O60741 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms