Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.36■□□□□ 0.21
PEX1O43933 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 AP002469.2-201ENST00000531724 424 ntBASIC16.36■□□□□ 0.21
PEX1O43933 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.36■□□□□ 0.21
PEX1O43933 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PEX1O43933 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PEX1O43933 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PEX1O43933 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.35■□□□□ 0.21
PEX1O43933 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.35■□□□□ 0.21
PEX1O43933 AP002414.2-201ENST00000591780 3365 ntBASIC16.35■□□□□ 0.21
PEX1O43933 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PEX1O43933 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PEX1O43933 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.34■□□□□ 0.21
PEX1O43933 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.34■□□□□ 0.21
PEX1O43933 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.34■□□□□ 0.21
PEX1O43933 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
PEX1O43933 AL662844.1-201ENST00000546340 181 ntBASIC16.34■□□□□ 0.21
PEX1O43933 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.34■□□□□ 0.21
PEX1O43933 AL139327.4-201ENST00000612362 153 ntBASIC16.34■□□□□ 0.21
PEX1O43933 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.34■□□□□ 0.21
PEX1O43933 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PEX1O43933 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.34■□□□□ 0.21
PEX1O43933 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PEX1O43933 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PEX1O43933 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PEX1O43933 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PEX1O43933 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms