Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RIPK2O43353 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RIPK2O43353 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RIPK2O43353 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.99■□□□□ 0.31
RIPK2O43353 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RIPK2O43353 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RIPK2O43353 KRT8P39-201ENST00000396270 1433 ntBASIC16.98■□□□□ 0.31
RIPK2O43353 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.98■□□□□ 0.31
RIPK2O43353 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.98■□□□□ 0.31
RIPK2O43353 BNIP3P18-201ENST00000593976 575 ntBASIC16.98■□□□□ 0.31
RIPK2O43353 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.98■□□□□ 0.31
RIPK2O43353 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 AC073592.4-201ENST00000623827 446 ntBASIC16.98■□□□□ 0.31
RIPK2O43353 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.98■□□□□ 0.31
RIPK2O43353 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.98■□□□□ 0.31
RIPK2O43353 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RIPK2O43353 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.97■□□□□ 0.31
RIPK2O43353 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.97■□□□□ 0.31
RIPK2O43353 CHCHD2P8-201ENST00000429873 447 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 AC104076.2-201ENST00000448912 469 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.97■□□□□ 0.31
RIPK2O43353 AC096582.2-201ENST00000510860 516 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 AL136038.3-201ENST00000561909 1096 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.97■□□□□ 0.31
RIPK2O43353 MIR4492-201ENST00000581627 80 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 AL353135.1-201ENST00000606729 504 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 AC233702.3-201ENST00000578656 1387 ntBASIC16.97■□□□□ 0.31
RIPK2O43353 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.97■□□□□ 0.31
RIPK2O43353 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.97■□□□□ 0.31
RIPK2O43353 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RIPK2O43353 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.96■□□□□ 0.31
RIPK2O43353 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms