Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 AC011558.1-201ENST00000623459 338 ntBASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MEIS3P1A6NDR6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 ATP5G1P1-201ENST00000448724 379 ntBASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 AC010203.1-204ENST00000548782 407 ntBASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 AL353593.2-201ENST00000602529 1483 ntBASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MEIS3P1A6NDR6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MEIS3P1A6NDR6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MEIS3P1A6NDR6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms