Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 GPAA1P2-202ENST00000606848 1787 ntBASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC074386.1-202ENST00000463561 864 ntBASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC020765.3-201ENST00000613051 740 ntBASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC196A0A1B0GTZ2 GGT4P-201ENST00000623672 1708 ntBASIC19.39■□□□□ 0.7
CCDC196A0A1B0GTZ2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC196A0A1B0GTZ2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CCDC196A0A1B0GTZ2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC196A0A1B0GTZ2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC040169.1-201ENST00000565382 521 ntBASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL009183.1-201ENST00000603760 355 ntBASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC196A0A1B0GTZ2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC196A0A1B0GTZ2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms