Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCFC2Q9Y5Z7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
HCFC2Q9Y5Z7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.36■■□□□ 1.65
HCFC2Q9Y5Z7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
HCFC2Q9Y5Z7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
HCFC2Q9Y5Z7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
HCFC2Q9Y5Z7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.36■■□□□ 1.65
HCFC2Q9Y5Z7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCFC2Q9Y5Z7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCFC2Q9Y5Z7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
HCFC2Q9Y5Z7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCFC2Q9Y5Z7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 AC131281.2-201ENST00000520478 145 ntBASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.34■■□□□ 1.65
HCFC2Q9Y5Z7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 AL139246.5-201ENST00000606645 996 ntBASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCFC2Q9Y5Z7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HCFC2Q9Y5Z7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.31■■□□□ 1.64
HCFC2Q9Y5Z7 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.31■■□□□ 1.64
HCFC2Q9Y5Z7 MIR4281-201ENST00000580852 62 ntBASIC25.31■■□□□ 1.64
HCFC2Q9Y5Z7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.31■■□□□ 1.64
HCFC2Q9Y5Z7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.31■■□□□ 1.64
HCFC2Q9Y5Z7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.31■■□□□ 1.64
HCFC2Q9Y5Z7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HCFC2Q9Y5Z7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HCFC2Q9Y5Z7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.29■■□□□ 1.64
HCFC2Q9Y5Z7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HCFC2Q9Y5Z7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
HCFC2Q9Y5Z7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HCFC2Q9Y5Z7 AC142472.1-201ENST00000612013 1741 ntBASIC25.29■■□□□ 1.64
HCFC2Q9Y5Z7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
HCFC2Q9Y5Z7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.28■■□□□ 1.64
HCFC2Q9Y5Z7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HCFC2Q9Y5Z7 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.27■■□□□ 1.64
HCFC2Q9Y5Z7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HCFC2Q9Y5Z7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HCFC2Q9Y5Z7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
HCFC2Q9Y5Z7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HCFC2Q9Y5Z7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HCFC2Q9Y5Z7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 AL136116.3-201ENST00000402907 1138 ntBASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 AL117332.1-201ENST00000622628 974 ntBASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
HCFC2Q9Y5Z7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
HCFC2Q9Y5Z7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HCFC2Q9Y5Z7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HCFC2Q9Y5Z7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
HCFC2Q9Y5Z7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.23■■□□□ 1.63
HCFC2Q9Y5Z7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
HCFC2Q9Y5Z7 AC010997.5-201ENST00000609182 354 ntBASIC25.23■■□□□ 1.63
HCFC2Q9Y5Z7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.22■■□□□ 1.63
HCFC2Q9Y5Z7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.22■■□□□ 1.63
HCFC2Q9Y5Z7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
HCFC2Q9Y5Z7 MIR3621-201ENST00000580529 85 ntBASIC25.21■■□□□ 1.63
HCFC2Q9Y5Z7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
HCFC2Q9Y5Z7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
HCFC2Q9Y5Z7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
HCFC2Q9Y5Z7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms