Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDHGA2Q9Y5H1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHGA2Q9Y5H1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA2Q9Y5H1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA2Q9Y5H1 DRD5P2-201ENST00000421395 2012 ntBASIC24.32■■□□□ 1.48
PCDHGA2Q9Y5H1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA2Q9Y5H1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 AC133561.4-201ENST00000566112 224 ntBASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGA2Q9Y5H1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA2Q9Y5H1 WHAMMP3-201ENST00000611636 1609 ntBASIC24.29■■□□□ 1.48
PCDHGA2Q9Y5H1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHGA2Q9Y5H1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA2Q9Y5H1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA2Q9Y5H1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA2Q9Y5H1 AL117332.1-201ENST00000622628 974 ntBASIC24.28■■□□□ 1.48
PCDHGA2Q9Y5H1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHGA2Q9Y5H1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA2Q9Y5H1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 AC092666.2-201ENST00000613287 246 ntBASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA2Q9Y5H1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 AC096631.2-201ENST00000436136 790 ntBASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 MIR3621-201ENST00000580529 85 ntBASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA2Q9Y5H1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 AC120024.1-201ENST00000562672 995 ntBASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA2Q9Y5H1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA2Q9Y5H1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA2Q9Y5H1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA2Q9Y5H1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA2Q9Y5H1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHGA2Q9Y5H1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PCDHGA2Q9Y5H1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PCDHGA2Q9Y5H1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA2Q9Y5H1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA2Q9Y5H1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA2Q9Y5H1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
PCDHGA2Q9Y5H1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHGA2Q9Y5H1 AC010997.5-201ENST00000609182 354 ntBASIC24.21■■□□□ 1.47
PCDHGA2Q9Y5H1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHGA2Q9Y5H1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA2Q9Y5H1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGA2Q9Y5H1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
PCDHGA2Q9Y5H1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 AL356740.2-201ENST00000601559 647 ntBASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 MIR6724-1-201ENST00000616420 92 ntBASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 MIR6724-2-201ENST00000616483 92 ntBASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 MIR6724-4-201ENST00000617390 92 ntBASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 MIR6724-3-201ENST00000622482 92 ntBASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDHGA2Q9Y5H1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDHGA2Q9Y5H1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA2Q9Y5H1 RARRES2P6-201ENST00000567333 442 ntBASIC24.19■■□□□ 1.46
PCDHGA2Q9Y5H1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA2Q9Y5H1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHGA2Q9Y5H1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms