Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB3Q9Y5G1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHGB3Q9Y5G1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB3Q9Y5G1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB3Q9Y5G1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB3Q9Y5G1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB3Q9Y5G1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB3Q9Y5G1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB3Q9Y5G1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB3Q9Y5G1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGB3Q9Y5G1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHGB3Q9Y5G1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB3Q9Y5G1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB3Q9Y5G1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB3Q9Y5G1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGB3Q9Y5G1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB3Q9Y5G1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGB3Q9Y5G1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB3Q9Y5G1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB3Q9Y5G1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB3Q9Y5G1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB3Q9Y5G1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB3Q9Y5G1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 AC012354.3-201ENST00000623734 483 ntBASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 AC022211.4-201ENST00000625094 2161 ntBASIC22.42■■□□□ 1.18
PCDHGB3Q9Y5G1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB3Q9Y5G1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB3Q9Y5G1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGB3Q9Y5G1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGB3Q9Y5G1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGB3Q9Y5G1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB3Q9Y5G1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB3Q9Y5G1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHGB3Q9Y5G1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB3Q9Y5G1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PCDHGB3Q9Y5G1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB3Q9Y5G1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 AC138932.3-201ENST00000567634 1902 ntBASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 RP9P-202ENST00000450133 1212 ntBASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 U85056.1-201ENST00000616429 682 ntBASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms