Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.68■□□□□ 0.9
LAMP3Q9UQV4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LAMP3Q9UQV4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP3Q9UQV4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LAMP3Q9UQV4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP3Q9UQV4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 LONRF2P2-201ENST00000439212 571 ntBASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP3Q9UQV4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 THA1P-201ENST00000590384 1145 ntBASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP3Q9UQV4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP3Q9UQV4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.65■□□□□ 0.9
LAMP3Q9UQV4 AL592295.1-201ENST00000400984 884 ntBASIC20.65■□□□□ 0.9
LAMP3Q9UQV4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.65■□□□□ 0.9
LAMP3Q9UQV4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.65■□□□□ 0.9
LAMP3Q9UQV4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP3Q9UQV4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LAMP3Q9UQV4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LAMP3Q9UQV4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
LAMP3Q9UQV4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LAMP3Q9UQV4 AC239859.2-201ENST00000444165 318 ntBASIC20.64■□□□□ 0.89
LAMP3Q9UQV4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LAMP3Q9UQV4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LAMP3Q9UQV4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LAMP3Q9UQV4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 KRT18P10-201ENST00000388836 1287 ntBASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
LAMP3Q9UQV4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LAMP3Q9UQV4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LAMP3Q9UQV4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LAMP3Q9UQV4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LAMP3Q9UQV4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
LAMP3Q9UQV4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LAMP3Q9UQV4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LAMP3Q9UQV4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMP3Q9UQV4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LAMP3Q9UQV4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMP3Q9UQV4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LAMP3Q9UQV4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.58■□□□□ 0.89
LAMP3Q9UQV4 AL356441.2-201ENST00000443009 864 ntBASIC20.58■□□□□ 0.89
LAMP3Q9UQV4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LAMP3Q9UQV4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LAMP3Q9UQV4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LAMP3Q9UQV4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LAMP3Q9UQV4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 Z92544.1-202ENST00000571933 1220 ntBASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMP3Q9UQV4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMP3Q9UQV4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms