Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.46■□□□□ 0.87
MSL2Q9HCI7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
MSL2Q9HCI7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
MSL2Q9HCI7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSL2Q9HCI7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MSL2Q9HCI7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MSL2Q9HCI7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
MSL2Q9HCI7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 DUSP8P4-201ENST00000399538 1761 ntBASIC20.44■□□□□ 0.86
MSL2Q9HCI7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MSL2Q9HCI7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MSL2Q9HCI7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.43■□□□□ 0.86
MSL2Q9HCI7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.43■□□□□ 0.86
MSL2Q9HCI7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.43■□□□□ 0.86
MSL2Q9HCI7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.43■□□□□ 0.86
MSL2Q9HCI7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MSL2Q9HCI7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MSL2Q9HCI7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MSL2Q9HCI7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MSL2Q9HCI7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.42■□□□□ 0.86
MSL2Q9HCI7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.42■□□□□ 0.86
MSL2Q9HCI7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 BHLHE23-202ENST00000612929 1109 ntBASIC20.41■□□□□ 0.86
MSL2Q9HCI7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MSL2Q9HCI7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MSL2Q9HCI7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
MSL2Q9HCI7 AC139795.1-202ENST00000500444 432 ntBASIC20.4■□□□□ 0.86
MSL2Q9HCI7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.4■□□□□ 0.86
MSL2Q9HCI7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSL2Q9HCI7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.4■□□□□ 0.86
MSL2Q9HCI7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MSL2Q9HCI7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
MSL2Q9HCI7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSL2Q9HCI7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
MSL2Q9HCI7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.39■□□□□ 0.86
MSL2Q9HCI7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSL2Q9HCI7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MSL2Q9HCI7 KRT18P10-201ENST00000388836 1287 ntBASIC20.39■□□□□ 0.85
MSL2Q9HCI7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.39■□□□□ 0.85
MSL2Q9HCI7 RPS2P7-201ENST00000447334 885 ntBASIC20.39■□□□□ 0.85
MSL2Q9HCI7 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.39■□□□□ 0.85
MSL2Q9HCI7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.39■□□□□ 0.85
MSL2Q9HCI7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MSL2Q9HCI7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
MSL2Q9HCI7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 AC087393.1-201ENST00000582896 145 ntBASIC20.36■□□□□ 0.85
MSL2Q9HCI7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MSL2Q9HCI7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSL2Q9HCI7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms