Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SLC6A10P-202ENST00000431994 2058 ntBASIC24.85■■□□□ 1.57
DDX47Q9H0S4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
DDX47Q9H0S4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
DDX47Q9H0S4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
DDX47Q9H0S4 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.85■■□□□ 1.57
DDX47Q9H0S4 AP003733.4-201ENST00000623785 1697 ntBASIC24.85■■□□□ 1.57
DDX47Q9H0S4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
DDX47Q9H0S4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
DDX47Q9H0S4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DDX47Q9H0S4 AC097639.1-201ENST00000565519 1891 ntBASIC24.83■■□□□ 1.57
DDX47Q9H0S4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
DDX47Q9H0S4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
DDX47Q9H0S4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX47Q9H0S4 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.82■■□□□ 1.56
DDX47Q9H0S4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.82■■□□□ 1.56
DDX47Q9H0S4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX47Q9H0S4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX47Q9H0S4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
DDX47Q9H0S4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX47Q9H0S4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
DDX47Q9H0S4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.81■■□□□ 1.56
DDX47Q9H0S4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX47Q9H0S4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.79■■□□□ 1.56
DDX47Q9H0S4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX47Q9H0S4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DDX47Q9H0S4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.79■■□□□ 1.56
DDX47Q9H0S4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX47Q9H0S4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX47Q9H0S4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DDX47Q9H0S4 RPS2P35-201ENST00000443417 897 ntBASIC24.78■■□□□ 1.56
DDX47Q9H0S4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX47Q9H0S4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX47Q9H0S4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.77■■□□□ 1.56
DDX47Q9H0S4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX47Q9H0S4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX47Q9H0S4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.56
DDX47Q9H0S4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 AC133561.1-201ENST00000568600 2415 ntBASIC24.76■■□□□ 1.55
DDX47Q9H0S4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX47Q9H0S4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX47Q9H0S4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX47Q9H0S4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
DDX47Q9H0S4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX47Q9H0S4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX47Q9H0S4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.75■■□□□ 1.55
DDX47Q9H0S4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.74■■□□□ 1.55
DDX47Q9H0S4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
DDX47Q9H0S4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX47Q9H0S4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DDX47Q9H0S4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
DDX47Q9H0S4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.72■■□□□ 1.55
DDX47Q9H0S4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX47Q9H0S4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
DDX47Q9H0S4 LINC00543-201ENST00000567234 1845 ntBASIC24.72■■□□□ 1.55
DDX47Q9H0S4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
DDX47Q9H0S4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX47Q9H0S4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
DDX47Q9H0S4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
DDX47Q9H0S4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX47Q9H0S4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.7■■□□□ 1.54
DDX47Q9H0S4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 1180.5 ms