Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VRK1Q99986 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.87■□□□□ 0.93
VRK1Q99986 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VRK1Q99986 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK1Q99986 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VRK1Q99986 DUX4L9-201ENST00000449051 1259 ntBASIC20.86■□□□□ 0.93
VRK1Q99986 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VRK1Q99986 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VRK1Q99986 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK1Q99986 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VRK1Q99986 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK1Q99986 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.85■□□□□ 0.93
VRK1Q99986 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
VRK1Q99986 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.85■□□□□ 0.93
VRK1Q99986 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VRK1Q99986 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VRK1Q99986 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK1Q99986 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.85■□□□□ 0.93
VRK1Q99986 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK1Q99986 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.84■□□□□ 0.93
VRK1Q99986 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK1Q99986 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK1Q99986 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK1Q99986 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
VRK1Q99986 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VRK1Q99986 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.84■□□□□ 0.93
VRK1Q99986 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VRK1Q99986 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VRK1Q99986 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VRK1Q99986 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VRK1Q99986 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VRK1Q99986 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VRK1Q99986 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VRK1Q99986 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VRK1Q99986 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.83■□□□□ 0.92
VRK1Q99986 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
VRK1Q99986 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
VRK1Q99986 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.82■□□□□ 0.92
VRK1Q99986 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK1Q99986 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK1Q99986 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK1Q99986 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VRK1Q99986 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.82■□□□□ 0.92
VRK1Q99986 AC018755.3-202ENST00000596210 929 ntBASIC20.82■□□□□ 0.92
VRK1Q99986 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VRK1Q99986 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VRK1Q99986 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VRK1Q99986 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK1Q99986 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK1Q99986 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
VRK1Q99986 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK1Q99986 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK1Q99986 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VRK1Q99986 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VRK1Q99986 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.81■□□□□ 0.92
VRK1Q99986 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.8■□□□□ 0.92
VRK1Q99986 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
VRK1Q99986 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK1Q99986 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.8■□□□□ 0.92
VRK1Q99986 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VRK1Q99986 AC139795.1-202ENST00000500444 432 ntBASIC20.8■□□□□ 0.92
VRK1Q99986 MIR6765-201ENST00000614092 87 ntBASIC20.8■□□□□ 0.92
VRK1Q99986 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VRK1Q99986 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK1Q99986 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK1Q99986 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK1Q99986 SPCS2P3-201ENST00000500401 656 ntBASIC20.79■□□□□ 0.92
VRK1Q99986 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK1Q99986 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK1Q99986 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK1Q99986 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VRK1Q99986 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
VRK1Q99986 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK1Q99986 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
VRK1Q99986 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VRK1Q99986 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.78■□□□□ 0.92
VRK1Q99986 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK1Q99986 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK1Q99986 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK1Q99986 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK1Q99986 RARRES2P1-201ENST00000474487 481 ntBASIC20.77■□□□□ 0.92
VRK1Q99986 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.77■□□□□ 0.92
VRK1Q99986 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VRK1Q99986 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK1Q99986 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK1Q99986 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VRK1Q99986 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK1Q99986 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK1Q99986 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.76■□□□□ 0.91
VRK1Q99986 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VRK1Q99986 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRK1Q99986 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.75■□□□□ 0.91
VRK1Q99986 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRK1Q99986 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRK1Q99986 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VRK1Q99986 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VRK1Q99986 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRK1Q99986 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.75■□□□□ 0.91
VRK1Q99986 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK1Q99986 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms