Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
DUX3Q96PT4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.51■□□□□ 0.55
DUX3Q96PT4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
DUX3Q96PT4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DUX3Q96PT4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DUX3Q96PT4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.5■□□□□ 0.55
DUX3Q96PT4 AC103724.3-201ENST00000564481 992 ntBASIC18.5■□□□□ 0.55
DUX3Q96PT4 MIR4508-201ENST00000584178 70 ntBASIC18.5■□□□□ 0.55
DUX3Q96PT4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.5■□□□□ 0.55
DUX3Q96PT4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUX3Q96PT4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUX3Q96PT4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DUX3Q96PT4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.49■□□□□ 0.55
DUX3Q96PT4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.49■□□□□ 0.55
DUX3Q96PT4 AC009299.2-201ENST00000482477 511 ntBASIC18.49■□□□□ 0.55
DUX3Q96PT4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.49■□□□□ 0.55
DUX3Q96PT4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUX3Q96PT4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.49■□□□□ 0.55
DUX3Q96PT4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DUX3Q96PT4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUX3Q96PT4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUX3Q96PT4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUX3Q96PT4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUX3Q96PT4 LONRF2P2-201ENST00000439212 571 ntBASIC18.48■□□□□ 0.55
DUX3Q96PT4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DUX3Q96PT4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.48■□□□□ 0.55
DUX3Q96PT4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
DUX3Q96PT4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DUX3Q96PT4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DUX3Q96PT4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DUX3Q96PT4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUX3Q96PT4 AL031848.2-201ENST00000607670 837 ntBASIC18.47■□□□□ 0.55
DUX3Q96PT4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.47■□□□□ 0.55
DUX3Q96PT4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
DUX3Q96PT4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DUX3Q96PT4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DUX3Q96PT4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DUX3Q96PT4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.46■□□□□ 0.55
DUX3Q96PT4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DUX3Q96PT4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.46■□□□□ 0.55
DUX3Q96PT4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
DUX3Q96PT4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.45■□□□□ 0.54
DUX3Q96PT4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.45■□□□□ 0.54
DUX3Q96PT4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DUX3Q96PT4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
DUX3Q96PT4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DUX3Q96PT4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DUX3Q96PT4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
DUX3Q96PT4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DUX3Q96PT4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DUX3Q96PT4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.44■□□□□ 0.54
DUX3Q96PT4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
DUX3Q96PT4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DUX3Q96PT4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.43■□□□□ 0.54
DUX3Q96PT4 AC019171.1-201ENST00000601251 1056 ntBASIC18.43■□□□□ 0.54
DUX3Q96PT4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DUX3Q96PT4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
DUX3Q96PT4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DUX3Q96PT4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DUX3Q96PT4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DUX3Q96PT4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DUX3Q96PT4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
DUX3Q96PT4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DUX3Q96PT4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DUX3Q96PT4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DUX3Q96PT4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DUX3Q96PT4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DUX3Q96PT4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DUX3Q96PT4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.4■□□□□ 0.54
DUX3Q96PT4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DUX3Q96PT4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DUX3Q96PT4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.4■□□□□ 0.54
DUX3Q96PT4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DUX3Q96PT4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms