Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.87■■□□□ 1.41
NAF1Q96HR8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
NAF1Q96HR8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NAF1Q96HR8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
NAF1Q96HR8 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.86■■□□□ 1.41
NAF1Q96HR8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NAF1Q96HR8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NAF1Q96HR8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.86■■□□□ 1.41
NAF1Q96HR8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
NAF1Q96HR8 DUSP8P4-201ENST00000399538 1761 ntBASIC23.86■■□□□ 1.41
NAF1Q96HR8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
NAF1Q96HR8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
NAF1Q96HR8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.85■■□□□ 1.41
NAF1Q96HR8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NAF1Q96HR8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NAF1Q96HR8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.84■■□□□ 1.41
NAF1Q96HR8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NAF1Q96HR8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.84■■□□□ 1.41
NAF1Q96HR8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NAF1Q96HR8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NAF1Q96HR8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.84■■□□□ 1.41
NAF1Q96HR8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.84■■□□□ 1.41
NAF1Q96HR8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NAF1Q96HR8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
NAF1Q96HR8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.83■■□□□ 1.41
NAF1Q96HR8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.83■■□□□ 1.41
NAF1Q96HR8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NAF1Q96HR8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NAF1Q96HR8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NAF1Q96HR8 AC019069.1-201ENST00000610008 1333 ntBASIC23.83■■□□□ 1.4
NAF1Q96HR8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 LINC00543-201ENST00000567234 1845 ntBASIC23.82■■□□□ 1.4
NAF1Q96HR8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NAF1Q96HR8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.82■■□□□ 1.4
NAF1Q96HR8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NAF1Q96HR8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NAF1Q96HR8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
NAF1Q96HR8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NAF1Q96HR8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NAF1Q96HR8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.81■■□□□ 1.4
NAF1Q96HR8 AC010980.1-201ENST00000587192 1142 ntBASIC23.81■■□□□ 1.4
NAF1Q96HR8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.81■■□□□ 1.4
NAF1Q96HR8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.81■■□□□ 1.4
NAF1Q96HR8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NAF1Q96HR8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
NAF1Q96HR8 SMPD5-203ENST00000639008 1464 ntBASIC23.8■■□□□ 1.4
NAF1Q96HR8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.8■■□□□ 1.4
NAF1Q96HR8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NAF1Q96HR8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NAF1Q96HR8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 AC131212.1-201ENST00000613771 668 ntBASIC23.79■■□□□ 1.4
NAF1Q96HR8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.79■■□□□ 1.4
NAF1Q96HR8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NAF1Q96HR8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NAF1Q96HR8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
NAF1Q96HR8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NAF1Q96HR8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NAF1Q96HR8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NAF1Q96HR8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NAF1Q96HR8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.78■■□□□ 1.4
NAF1Q96HR8 ERN1-208ENST00000606895 2068 ntBASIC23.77■■□□□ 1.4
NAF1Q96HR8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.77■■□□□ 1.4
NAF1Q96HR8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NAF1Q96HR8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.77■■□□□ 1.4
NAF1Q96HR8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NAF1Q96HR8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NAF1Q96HR8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.77■■□□□ 1.4
NAF1Q96HR8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NAF1Q96HR8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NAF1Q96HR8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.76■■□□□ 1.39
NAF1Q96HR8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NAF1Q96HR8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NAF1Q96HR8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.76■■□□□ 1.39
NAF1Q96HR8 DUX4L9-201ENST00000449051 1259 ntBASIC23.76■■□□□ 1.39
NAF1Q96HR8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NAF1Q96HR8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NAF1Q96HR8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms