Protein–RNA interactions for Protein: Q92832

NELL1, Protein kinase C-binding protein NELL1, humanhuman

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL1Q92832 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NELL1Q92832 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
NELL1Q92832 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
NELL1Q92832 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NELL1Q92832 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.4■■□□□ 1.5
NELL1Q92832 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.4■■□□□ 1.5
NELL1Q92832 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NELL1Q92832 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NELL1Q92832 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NELL1Q92832 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.39■■□□□ 1.5
NELL1Q92832 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NELL1Q92832 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.39■■□□□ 1.5
NELL1Q92832 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NELL1Q92832 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NELL1Q92832 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
NELL1Q92832 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NELL1Q92832 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
NELL1Q92832 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.38■■□□□ 1.49
NELL1Q92832 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.38■■□□□ 1.49
NELL1Q92832 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
NELL1Q92832 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NELL1Q92832 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NELL1Q92832 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NELL1Q92832 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
NELL1Q92832 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NELL1Q92832 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NELL1Q92832 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.37■■□□□ 1.49
NELL1Q92832 KRT18P10-201ENST00000388836 1287 ntBASIC24.37■■□□□ 1.49
NELL1Q92832 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
NELL1Q92832 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.37■■□□□ 1.49
NELL1Q92832 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.37■■□□□ 1.49
NELL1Q92832 AC110285.6-201ENST00000617652 491 ntBASIC24.37■■□□□ 1.49
NELL1Q92832 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
NELL1Q92832 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NELL1Q92832 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.36■■□□□ 1.49
NELL1Q92832 WHAMMP3-201ENST00000611636 1609 ntBASIC24.36■■□□□ 1.49
NELL1Q92832 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
NELL1Q92832 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
NELL1Q92832 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
NELL1Q92832 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.36■■□□□ 1.49
NELL1Q92832 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
NELL1Q92832 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NELL1Q92832 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
NELL1Q92832 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NELL1Q92832 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NELL1Q92832 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NELL1Q92832 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NELL1Q92832 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.35■■□□□ 1.49
NELL1Q92832 TSPY9P-201ENST00000440215 945 ntBASIC24.35■■□□□ 1.49
NELL1Q92832 TSPY11P-201ENST00000442607 1045 ntBASIC24.35■■□□□ 1.49
NELL1Q92832 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NELL1Q92832 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NELL1Q92832 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
NELL1Q92832 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NELL1Q92832 BX255925.1-201ENST00000566954 1854 ntBASIC24.34■■□□□ 1.49
NELL1Q92832 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.34■■□□□ 1.49
NELL1Q92832 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.34■■□□□ 1.49
NELL1Q92832 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.34■■□□□ 1.49
NELL1Q92832 AC092028.1-203ENST00000608262 953 ntBASIC24.34■■□□□ 1.49
NELL1Q92832 AC005837.3-201ENST00000612163 286 ntBASIC24.34■■□□□ 1.49
NELL1Q92832 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NELL1Q92832 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NELL1Q92832 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NELL1Q92832 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.33■■□□□ 1.49
NELL1Q92832 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
NELL1Q92832 AL136116.3-201ENST00000402907 1138 ntBASIC24.33■■□□□ 1.49
NELL1Q92832 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.33■■□□□ 1.49
NELL1Q92832 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.33■■□□□ 1.49
NELL1Q92832 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
NELL1Q92832 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NELL1Q92832 AL121749.1-202ENST00000609313 2153 ntBASIC24.33■■□□□ 1.48
NELL1Q92832 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
NELL1Q92832 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NELL1Q92832 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NELL1Q92832 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.32■■□□□ 1.48
NELL1Q92832 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NELL1Q92832 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
NELL1Q92832 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.31■■□□□ 1.48
NELL1Q92832 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NELL1Q92832 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.31■■□□□ 1.48
NELL1Q92832 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.31■■□□□ 1.48
NELL1Q92832 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NELL1Q92832 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NELL1Q92832 AC133561.4-201ENST00000566112 224 ntBASIC24.3■■□□□ 1.48
NELL1Q92832 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.3■■□□□ 1.48
NELL1Q92832 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
NELL1Q92832 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NELL1Q92832 MIR3621-201ENST00000580529 85 ntBASIC24.29■■□□□ 1.48
NELL1Q92832 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
NELL1Q92832 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NELL1Q92832 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.28■■□□□ 1.48
NELL1Q92832 AC120024.1-201ENST00000562672 995 ntBASIC24.28■■□□□ 1.48
NELL1Q92832 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.28■■□□□ 1.48
NELL1Q92832 AL117332.1-201ENST00000622628 974 ntBASIC24.28■■□□□ 1.48
NELL1Q92832 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NELL1Q92832 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NELL1Q92832 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NELL1Q92832 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NELL1Q92832 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NELL1Q92832 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 347.8 ms