Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RAPGEF4Q8WZA2 AC021242.3-201ENST00000607598 1377 ntBASIC31.77■■■□□ 2.68
RAPGEF4Q8WZA2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RAPGEF4Q8WZA2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.76■■■□□ 2.68
RAPGEF4Q8WZA2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RAPGEF4Q8WZA2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
RAPGEF4Q8WZA2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
RAPGEF4Q8WZA2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RAPGEF4Q8WZA2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.76■■■□□ 2.67
RAPGEF4Q8WZA2 AP004609.3-201ENST00000610705 1884 ntBASIC31.76■■■□□ 2.67
RAPGEF4Q8WZA2 TSPY9P-201ENST00000440215 945 ntBASIC31.75■■■□□ 2.67
RAPGEF4Q8WZA2 TSPY11P-201ENST00000442607 1045 ntBASIC31.75■■■□□ 2.67
RAPGEF4Q8WZA2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.75■■■□□ 2.67
RAPGEF4Q8WZA2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF4Q8WZA2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.74■■■□□ 2.67
RAPGEF4Q8WZA2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.74■■■□□ 2.67
RAPGEF4Q8WZA2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF4Q8WZA2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAPGEF4Q8WZA2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF4Q8WZA2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF4Q8WZA2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.73■■■□□ 2.67
RAPGEF4Q8WZA2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF4Q8WZA2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF4Q8WZA2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RAPGEF4Q8WZA2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.72■■■□□ 2.67
RAPGEF4Q8WZA2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
RAPGEF4Q8WZA2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.71■■■□□ 2.67
RAPGEF4Q8WZA2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
RAPGEF4Q8WZA2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
RAPGEF4Q8WZA2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.7■■■□□ 2.67
RAPGEF4Q8WZA2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.7■■■□□ 2.67
RAPGEF4Q8WZA2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
RAPGEF4Q8WZA2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
RAPGEF4Q8WZA2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
RAPGEF4Q8WZA2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RAPGEF4Q8WZA2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RAPGEF4Q8WZA2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RAPGEF4Q8WZA2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
RAPGEF4Q8WZA2 AC092028.1-203ENST00000608262 953 ntBASIC31.67■■■□□ 2.66
RAPGEF4Q8WZA2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
RAPGEF4Q8WZA2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RAPGEF4Q8WZA2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
RAPGEF4Q8WZA2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.66■■■□□ 2.66
RAPGEF4Q8WZA2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.66■■■□□ 2.66
RAPGEF4Q8WZA2 MIR4281-201ENST00000580852 62 ntBASIC31.66■■■□□ 2.66
RAPGEF4Q8WZA2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RAPGEF4Q8WZA2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.64■■■□□ 2.66
RAPGEF4Q8WZA2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.63■■■□□ 2.65
RAPGEF4Q8WZA2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.63■■■□□ 2.65
RAPGEF4Q8WZA2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
RAPGEF4Q8WZA2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.63■■■□□ 2.65
RAPGEF4Q8WZA2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
RAPGEF4Q8WZA2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RAPGEF4Q8WZA2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
RAPGEF4Q8WZA2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.62■■■□□ 2.65
RAPGEF4Q8WZA2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.62■■■□□ 2.65
RAPGEF4Q8WZA2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RAPGEF4Q8WZA2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
RAPGEF4Q8WZA2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.6■■■□□ 2.65
RAPGEF4Q8WZA2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
RAPGEF4Q8WZA2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.59■■■□□ 2.65
RAPGEF4Q8WZA2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
RAPGEF4Q8WZA2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RAPGEF4Q8WZA2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RAPGEF4Q8WZA2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RAPGEF4Q8WZA2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RAPGEF4Q8WZA2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
RAPGEF4Q8WZA2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
RAPGEF4Q8WZA2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
RAPGEF4Q8WZA2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.57■■■□□ 2.64
RAPGEF4Q8WZA2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
RAPGEF4Q8WZA2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.57■■■□□ 2.64
RAPGEF4Q8WZA2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.57■■■□□ 2.64
RAPGEF4Q8WZA2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RAPGEF4Q8WZA2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.56■■■□□ 2.64
RAPGEF4Q8WZA2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RAPGEF4Q8WZA2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RAPGEF4Q8WZA2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RAPGEF4Q8WZA2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RAPGEF4Q8WZA2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
RAPGEF4Q8WZA2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms