Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC29.76■■■□□ 2.35
RTL9Q8NET4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
RTL9Q8NET4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
RTL9Q8NET4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RTL9Q8NET4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RTL9Q8NET4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RTL9Q8NET4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.75■■■□□ 2.35
RTL9Q8NET4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.74■■■□□ 2.35
RTL9Q8NET4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
RTL9Q8NET4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
RTL9Q8NET4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC29.74■■■□□ 2.35
RTL9Q8NET4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.74■■■□□ 2.35
RTL9Q8NET4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.73■■■□□ 2.35
RTL9Q8NET4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
RTL9Q8NET4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.72■■■□□ 2.35
RTL9Q8NET4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RTL9Q8NET4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.72■■■□□ 2.35
RTL9Q8NET4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
RTL9Q8NET4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
RTL9Q8NET4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.72■■■□□ 2.35
RTL9Q8NET4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
RTL9Q8NET4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
RTL9Q8NET4 AC239859.2-201ENST00000444165 318 ntBASIC29.71■■■□□ 2.35
RTL9Q8NET4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.71■■■□□ 2.35
RTL9Q8NET4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.71■■■□□ 2.35
RTL9Q8NET4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RTL9Q8NET4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RTL9Q8NET4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.71■■■□□ 2.35
RTL9Q8NET4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RTL9Q8NET4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.7■■■□□ 2.35
RTL9Q8NET4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
RTL9Q8NET4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.7■■■□□ 2.35
RTL9Q8NET4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
RTL9Q8NET4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
RTL9Q8NET4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
RTL9Q8NET4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.7■■■□□ 2.34
RTL9Q8NET4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.69■■■□□ 2.34
RTL9Q8NET4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
RTL9Q8NET4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RTL9Q8NET4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RTL9Q8NET4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.69■■■□□ 2.34
RTL9Q8NET4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RTL9Q8NET4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.69■■■□□ 2.34
RTL9Q8NET4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RTL9Q8NET4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RTL9Q8NET4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RTL9Q8NET4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RTL9Q8NET4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
RTL9Q8NET4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC29.68■■■□□ 2.34
RTL9Q8NET4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.68■■■□□ 2.34
RTL9Q8NET4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RTL9Q8NET4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RTL9Q8NET4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RTL9Q8NET4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RTL9Q8NET4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
RTL9Q8NET4 AC120024.1-201ENST00000562672 995 ntBASIC29.66■■■□□ 2.34
RTL9Q8NET4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.66■■■□□ 2.34
RTL9Q8NET4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RTL9Q8NET4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.65■■■□□ 2.34
RTL9Q8NET4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.65■■■□□ 2.34
RTL9Q8NET4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RTL9Q8NET4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RTL9Q8NET4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.64■■■□□ 2.34
RTL9Q8NET4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.64■■■□□ 2.34
RTL9Q8NET4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RTL9Q8NET4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RTL9Q8NET4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
RTL9Q8NET4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.64■■■□□ 2.33
RTL9Q8NET4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RTL9Q8NET4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.33
RTL9Q8NET4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
RTL9Q8NET4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.63■■■□□ 2.33
RTL9Q8NET4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
RTL9Q8NET4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.63■■■□□ 2.33
RTL9Q8NET4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
RTL9Q8NET4 AC137630.3-201ENST00000607245 391 ntBASIC29.63■■■□□ 2.33
RTL9Q8NET4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTL9Q8NET4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTL9Q8NET4 BX664725.1-201ENST00000438252 379 ntBASIC29.62■■■□□ 2.33
RTL9Q8NET4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.62■■■□□ 2.33
RTL9Q8NET4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.62■■■□□ 2.33
RTL9Q8NET4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTL9Q8NET4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTL9Q8NET4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTL9Q8NET4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
RTL9Q8NET4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTL9Q8NET4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RTL9Q8NET4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RTL9Q8NET4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RTL9Q8NET4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
RTL9Q8NET4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RTL9Q8NET4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.6■■■□□ 2.33
RTL9Q8NET4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTL9Q8NET4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTL9Q8NET4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTL9Q8NET4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.58■■■□□ 2.33
RTL9Q8NET4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTL9Q8NET4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTL9Q8NET4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.57■■■□□ 2.32
RTL9Q8NET4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms