Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZSWIM2Q8NEG5 MIR6765-201ENST00000614092 87 ntBASIC26.1■■□□□ 1.77
ZSWIM2Q8NEG5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZSWIM2Q8NEG5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 AC018755.3-202ENST00000596210 929 ntBASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZSWIM2Q8NEG5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZSWIM2Q8NEG5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZSWIM2Q8NEG5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZSWIM2Q8NEG5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZSWIM2Q8NEG5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.08■■□□□ 1.77
ZSWIM2Q8NEG5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZSWIM2Q8NEG5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZSWIM2Q8NEG5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZSWIM2Q8NEG5 TSPY13P-201ENST00000338964 914 ntBASIC26.07■■□□□ 1.76
ZSWIM2Q8NEG5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.07■■□□□ 1.76
ZSWIM2Q8NEG5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.06■■□□□ 1.76
ZSWIM2Q8NEG5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.05■■□□□ 1.76
ZSWIM2Q8NEG5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZSWIM2Q8NEG5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ZSWIM2Q8NEG5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.03■■□□□ 1.76
ZSWIM2Q8NEG5 RPS2P7-201ENST00000447334 885 ntBASIC26.03■■□□□ 1.76
ZSWIM2Q8NEG5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ZSWIM2Q8NEG5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.02■■□□□ 1.76
ZSWIM2Q8NEG5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZSWIM2Q8NEG5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZSWIM2Q8NEG5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZSWIM2Q8NEG5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZSWIM2Q8NEG5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
ZSWIM2Q8NEG5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.01■■□□□ 1.75
ZSWIM2Q8NEG5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.01■■□□□ 1.75
ZSWIM2Q8NEG5 AC097639.1-201ENST00000565519 1891 ntBASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26■■□□□ 1.75
ZSWIM2Q8NEG5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZSWIM2Q8NEG5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZSWIM2Q8NEG5 AC087393.1-201ENST00000582896 145 ntBASIC25.99■■□□□ 1.75
ZSWIM2Q8NEG5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZSWIM2Q8NEG5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZSWIM2Q8NEG5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
ZSWIM2Q8NEG5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZSWIM2Q8NEG5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZSWIM2Q8NEG5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZSWIM2Q8NEG5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZSWIM2Q8NEG5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 PVT1_1.1-201ENST00000615125 194 ntBASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 AC020928.2-201ENST00000588717 2197 ntBASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.97■■□□□ 1.75
ZSWIM2Q8NEG5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ZSWIM2Q8NEG5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZSWIM2Q8NEG5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.96■■□□□ 1.75
ZSWIM2Q8NEG5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZSWIM2Q8NEG5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms