Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 AC138932.3-201ENST00000567634 1902 ntBASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.77■□□□□ 0.59
TMEM116Q8NCL8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM116Q8NCL8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM116Q8NCL8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 AC097639.1-201ENST00000565519 1891 ntBASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 AL139125.2-201ENST00000623134 1869 ntBASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 MIR4449-201ENST00000578365 66 ntBASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM116Q8NCL8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM116Q8NCL8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM116Q8NCL8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 AP003733.4-201ENST00000623785 1697 ntBASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 AC025884.2-201ENST00000553429 711 ntBASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 AL157400.5-201ENST00000507624 621 ntBASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms