Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM116Q8NCL8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 AC138932.3-201ENST00000567634 1902 ntBASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM116Q8NCL8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.77■□□□□ 0.59
TMEM116Q8NCL8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM116Q8NCL8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM116Q8NCL8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TMEM116Q8NCL8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM116Q8NCL8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 AC097639.1-201ENST00000565519 1891 ntBASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM116Q8NCL8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM116Q8NCL8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM116Q8NCL8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 AL139125.2-201ENST00000623134 1869 ntBASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 MIR4449-201ENST00000578365 66 ntBASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM116Q8NCL8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM116Q8NCL8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM116Q8NCL8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM116Q8NCL8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM116Q8NCL8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM116Q8NCL8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 AP003733.4-201ENST00000623785 1697 ntBASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 AC025884.2-201ENST00000553429 711 ntBASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM116Q8NCL8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 AL157400.5-201ENST00000507624 621 ntBASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM116Q8NCL8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms