Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SPCS2P3-201ENST00000500401 656 ntBASIC23.23■■□□□ 1.31
RAB42Q8N4Z0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.23■■□□□ 1.31
RAB42Q8N4Z0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.22■■□□□ 1.31
RAB42Q8N4Z0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.22■■□□□ 1.31
RAB42Q8N4Z0 ATP5G2P3-201ENST00000429083 425 ntBASIC23.22■■□□□ 1.31
RAB42Q8N4Z0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.22■■□□□ 1.31
RAB42Q8N4Z0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RAB42Q8N4Z0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAB42Q8N4Z0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 AC004987.1-201ENST00000428627 508 ntBASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.2■■□□□ 1.3
RAB42Q8N4Z0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 AC139795.1-202ENST00000500444 432 ntBASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 DUX4L18-201ENST00000553347 1267 ntBASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RAB42Q8N4Z0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 AC096887.2-201ENST00000623443 1957 ntBASIC23.18■■□□□ 1.3
RAB42Q8N4Z0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 RPS2P7-201ENST00000447334 885 ntBASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB42Q8N4Z0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
RAB42Q8N4Z0 AC097639.1-201ENST00000565519 1891 ntBASIC23.16■■□□□ 1.3
RAB42Q8N4Z0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB42Q8N4Z0 BHLHE23-202ENST00000612929 1109 ntBASIC23.16■■□□□ 1.3
RAB42Q8N4Z0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB42Q8N4Z0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.15■■□□□ 1.3
RAB42Q8N4Z0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAB42Q8N4Z0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.14■■□□□ 1.29
RAB42Q8N4Z0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAB42Q8N4Z0 AC087393.1-201ENST00000582896 145 ntBASIC23.14■■□□□ 1.29
RAB42Q8N4Z0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.14■■□□□ 1.29
RAB42Q8N4Z0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAB42Q8N4Z0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 AL033527.3-201ENST00000566366 1196 ntBASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 AC074183.2-201ENST00000623112 922 ntBASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAB42Q8N4Z0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RAB42Q8N4Z0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RAB42Q8N4Z0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.11■■□□□ 1.29
RAB42Q8N4Z0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.11■■□□□ 1.29
RAB42Q8N4Z0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAB42Q8N4Z0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAB42Q8N4Z0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RAB42Q8N4Z0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAB42Q8N4Z0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms