Protein–RNA interactions for Protein: Q8IVH2

FOXP4, Forkhead box protein P4, humanhuman

Predicted RBP Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4Q8IVH2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
FOXP4Q8IVH2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
FOXP4Q8IVH2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
FOXP4Q8IVH2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
FOXP4Q8IVH2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.48■■■□□ 2.15
FOXP4Q8IVH2 GUSBP5-201ENST00000418136 578 ntBASIC28.48■■■□□ 2.15
FOXP4Q8IVH2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
FOXP4Q8IVH2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
FOXP4Q8IVH2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
FOXP4Q8IVH2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
FOXP4Q8IVH2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
FOXP4Q8IVH2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
FOXP4Q8IVH2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
FOXP4Q8IVH2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
FOXP4Q8IVH2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
FOXP4Q8IVH2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.45■■■□□ 2.14
FOXP4Q8IVH2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
FOXP4Q8IVH2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.44■■■□□ 2.14
FOXP4Q8IVH2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
FOXP4Q8IVH2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.44■■■□□ 2.14
FOXP4Q8IVH2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
FOXP4Q8IVH2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
FOXP4Q8IVH2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.43■■■□□ 2.14
FOXP4Q8IVH2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
FOXP4Q8IVH2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.42■■■□□ 2.14
FOXP4Q8IVH2 KRT18P24-201ENST00000344739 1156 ntBASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 Z92544.1-202ENST00000571933 1220 ntBASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
FOXP4Q8IVH2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
FOXP4Q8IVH2 AC239859.2-201ENST00000444165 318 ntBASIC28.4■■■□□ 2.14
FOXP4Q8IVH2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.4■■■□□ 2.14
FOXP4Q8IVH2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
FOXP4Q8IVH2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
FOXP4Q8IVH2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.14
FOXP4Q8IVH2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.39■■■□□ 2.14
FOXP4Q8IVH2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
FOXP4Q8IVH2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
FOXP4Q8IVH2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
FOXP4Q8IVH2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
FOXP4Q8IVH2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.37■■■□□ 2.13
FOXP4Q8IVH2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.37■■■□□ 2.13
FOXP4Q8IVH2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
FOXP4Q8IVH2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
FOXP4Q8IVH2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.35■■■□□ 2.13
FOXP4Q8IVH2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
FOXP4Q8IVH2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
FOXP4Q8IVH2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FOXP4Q8IVH2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FOXP4Q8IVH2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
FOXP4Q8IVH2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
FOXP4Q8IVH2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.33■■■□□ 2.13
FOXP4Q8IVH2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.33■■■□□ 2.13
FOXP4Q8IVH2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.33■■■□□ 2.13
FOXP4Q8IVH2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
FOXP4Q8IVH2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
FOXP4Q8IVH2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.32■■■□□ 2.12
FOXP4Q8IVH2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.31■■■□□ 2.12
FOXP4Q8IVH2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
FOXP4Q8IVH2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
FOXP4Q8IVH2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
FOXP4Q8IVH2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.3■■■□□ 2.12
FOXP4Q8IVH2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
FOXP4Q8IVH2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.29■■■□□ 2.12
FOXP4Q8IVH2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.29■■■□□ 2.12
FOXP4Q8IVH2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms