Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NPAS4Q8IUM7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPAS4Q8IUM7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.97■■□□□ 1.75
NPAS4Q8IUM7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NPAS4Q8IUM7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.97■■□□□ 1.75
NPAS4Q8IUM7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 AP004609.3-201ENST00000610705 1884 ntBASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPAS4Q8IUM7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NPAS4Q8IUM7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 TSPY9P-201ENST00000440215 945 ntBASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 TSPY11P-201ENST00000442607 1045 ntBASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
NPAS4Q8IUM7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
NPAS4Q8IUM7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
NPAS4Q8IUM7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.94■■□□□ 1.74
NPAS4Q8IUM7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.94■■□□□ 1.74
NPAS4Q8IUM7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NPAS4Q8IUM7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NPAS4Q8IUM7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
NPAS4Q8IUM7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NPAS4Q8IUM7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.92■■□□□ 1.74
NPAS4Q8IUM7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.92■■□□□ 1.74
NPAS4Q8IUM7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.92■■□□□ 1.74
NPAS4Q8IUM7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NPAS4Q8IUM7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.91■■□□□ 1.74
NPAS4Q8IUM7 MIR4281-201ENST00000580852 62 ntBASIC25.91■■□□□ 1.74
NPAS4Q8IUM7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 AC092028.1-203ENST00000608262 953 ntBASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NPAS4Q8IUM7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
NPAS4Q8IUM7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.88■■□□□ 1.73
NPAS4Q8IUM7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.88■■□□□ 1.73
NPAS4Q8IUM7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NPAS4Q8IUM7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NPAS4Q8IUM7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
NPAS4Q8IUM7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NPAS4Q8IUM7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NPAS4Q8IUM7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.86■■□□□ 1.73
NPAS4Q8IUM7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.86■■□□□ 1.73
NPAS4Q8IUM7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
NPAS4Q8IUM7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
NPAS4Q8IUM7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.85■■□□□ 1.73
NPAS4Q8IUM7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.85■■□□□ 1.73
NPAS4Q8IUM7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NPAS4Q8IUM7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
NPAS4Q8IUM7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
NPAS4Q8IUM7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
NPAS4Q8IUM7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.84■■□□□ 1.73
NPAS4Q8IUM7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.84■■□□□ 1.73
NPAS4Q8IUM7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NPAS4Q8IUM7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.83■■□□□ 1.73
NPAS4Q8IUM7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
NPAS4Q8IUM7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.83■■□□□ 1.73
NPAS4Q8IUM7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
NPAS4Q8IUM7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.83■■□□□ 1.72
NPAS4Q8IUM7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 AC011551.1-201ENST00000614101 683 ntBASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
NPAS4Q8IUM7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.81■■□□□ 1.72
NPAS4Q8IUM7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms