Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 AC011551.1-201ENST00000614101 683 ntBASIC20.72■□□□□ 0.91
SSX8Q7RTT4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.72■□□□□ 0.91
SSX8Q7RTT4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.71■□□□□ 0.91
SSX8Q7RTT4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SSX8Q7RTT4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 THA1P-201ENST00000590384 1145 ntBASIC20.7■□□□□ 0.9
SSX8Q7RTT4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSX8Q7RTT4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX8Q7RTT4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX8Q7RTT4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX8Q7RTT4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
SSX8Q7RTT4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX8Q7RTT4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSX8Q7RTT4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.68■□□□□ 0.9
SSX8Q7RTT4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX8Q7RTT4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.68■□□□□ 0.9
SSX8Q7RTT4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX8Q7RTT4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX8Q7RTT4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX8Q7RTT4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.67■□□□□ 0.9
SSX8Q7RTT4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX8Q7RTT4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SSX8Q7RTT4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SSX8Q7RTT4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX8Q7RTT4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX8Q7RTT4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX8Q7RTT4 BX664725.1-201ENST00000438252 379 ntBASIC20.66■□□□□ 0.9
SSX8Q7RTT4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX8Q7RTT4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSX8Q7RTT4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 KRT125P-201ENST00000546827 989 ntBASIC20.64■□□□□ 0.89
SSX8Q7RTT4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX8Q7RTT4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.63■□□□□ 0.89
SSX8Q7RTT4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX8Q7RTT4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX8Q7RTT4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SSX8Q7RTT4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SSX8Q7RTT4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.61■□□□□ 0.89
SSX8Q7RTT4 AC120024.1-201ENST00000562672 995 ntBASIC20.61■□□□□ 0.89
SSX8Q7RTT4 AC137630.3-201ENST00000607245 391 ntBASIC20.61■□□□□ 0.89
SSX8Q7RTT4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSX8Q7RTT4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.6■□□□□ 0.89
SSX8Q7RTT4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
SSX8Q7RTT4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSX8Q7RTT4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms