Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
DCLRE1AQ6PJP8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
DCLRE1AQ6PJP8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DCLRE1AQ6PJP8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.67■■□□□ 1.7
DCLRE1AQ6PJP8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
DCLRE1AQ6PJP8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
DCLRE1AQ6PJP8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.66■■□□□ 1.7
DCLRE1AQ6PJP8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.65■■□□□ 1.7
DCLRE1AQ6PJP8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.65■■□□□ 1.7
DCLRE1AQ6PJP8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.65■■□□□ 1.7
DCLRE1AQ6PJP8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
DCLRE1AQ6PJP8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.64■■□□□ 1.7
DCLRE1AQ6PJP8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.64■■□□□ 1.7
DCLRE1AQ6PJP8 KRT18P24-201ENST00000344739 1156 ntBASIC25.64■■□□□ 1.7
DCLRE1AQ6PJP8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
DCLRE1AQ6PJP8 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.64■■□□□ 1.7
DCLRE1AQ6PJP8 AC131212.1-201ENST00000613771 668 ntBASIC25.64■■□□□ 1.7
DCLRE1AQ6PJP8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DCLRE1AQ6PJP8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.63■■□□□ 1.69
DCLRE1AQ6PJP8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.63■■□□□ 1.69
DCLRE1AQ6PJP8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DCLRE1AQ6PJP8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DCLRE1AQ6PJP8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 AL121749.1-202ENST00000609313 2153 ntBASIC25.61■■□□□ 1.69
DCLRE1AQ6PJP8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
DCLRE1AQ6PJP8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
DCLRE1AQ6PJP8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DCLRE1AQ6PJP8 GUSBP5-201ENST00000418136 578 ntBASIC25.59■■□□□ 1.69
DCLRE1AQ6PJP8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DCLRE1AQ6PJP8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
DCLRE1AQ6PJP8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DCLRE1AQ6PJP8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.58■■□□□ 1.69
DCLRE1AQ6PJP8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
DCLRE1AQ6PJP8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
DCLRE1AQ6PJP8 Z92544.1-202ENST00000571933 1220 ntBASIC25.58■■□□□ 1.69
DCLRE1AQ6PJP8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.58■■□□□ 1.69
DCLRE1AQ6PJP8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
DCLRE1AQ6PJP8 AC239859.2-201ENST00000444165 318 ntBASIC25.57■■□□□ 1.68
DCLRE1AQ6PJP8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.57■■□□□ 1.68
DCLRE1AQ6PJP8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DCLRE1AQ6PJP8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.57■■□□□ 1.68
DCLRE1AQ6PJP8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.57■■□□□ 1.68
DCLRE1AQ6PJP8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DCLRE1AQ6PJP8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 THA1P-201ENST00000590384 1145 ntBASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.56■■□□□ 1.68
DCLRE1AQ6PJP8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
DCLRE1AQ6PJP8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DCLRE1AQ6PJP8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DCLRE1AQ6PJP8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DCLRE1AQ6PJP8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
DCLRE1AQ6PJP8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
DCLRE1AQ6PJP8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DCLRE1AQ6PJP8 AC120024.1-201ENST00000562672 995 ntBASIC25.54■■□□□ 1.68
DCLRE1AQ6PJP8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DCLRE1AQ6PJP8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.54■■□□□ 1.68
DCLRE1AQ6PJP8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms